Package: TrenchR
Title: Tools for Microclimate and Biophysical Ecology
Description: Tools for translating environmental change into organismal
        response. Microclimate models to vertically scale weather
        station data to organismal heights. The biophysical modeling
        tools include both general models for heat flows and specific
        models to predict body temperatures for a variety of
        ectothermic taxa. Additional functions model and temporally
        partition air and soil temperatures and solar radiation.
        Utility functions estimate the organismal and environmental
        parameters needed for biophysical ecology. 'TrenchR' focuses on
        relatively simple and modular functions so users can create
        transparent and flexible biophysical models. Many functions are
        derived from Gates (1980) <doi:10.1007/978-1-4612-6024-0> and
        Campbell and Norman (1988) <isbn:9780387949376>.
Version: 1.2.1
Maintainer: Lauren Buckley <lbuckley@uw.edu>
Authors@R: c(
    person("Lauren", "Buckley", role = c("aut", "cre"), email = "lbuckley@uw.edu", comment = c(ORCID = "0000-0003-1315-3818")),
    person("Bryan", "Briones Ortiz", role = c("aut")),
    person("Isaac", "Caruso", role = c("aut")),
    person("Aji", "John", role = c("aut"), comment = c(ORCID = "0000-0002-4401-1401")),
    person("Ofir", "Levy", role = c("aut"), comment = c(ORCID = "0000-0003-0920-1207")),
    person("Abigail", "Meyer", role = c("aut")),
    person("Eric", "Riddell", role = c("aut"), comment = c(ORCID = "0000-0002-4229-4911")),
    person("Yutaro", "Sakairi", role = c("aut")),
    person("Juniper", "Simonis", role = c("aut"), comment = c(ORCID = "0000-0001-9798-0460")),
    person("Brian", "Helmuth", role = c("ctb"), comment = c(ORCID = "0000-0003-0180-3414"))
  )
License: MIT + file LICENSE
Date: 2026-04-28
URL: https://trenchproject.github.io/TrenchR/,
        https://github.com/trenchproject/TrenchR
BugReports: https://github.com/trenchproject/TrenchR/issues
VignetteBuilder: knitr
Depends: R (>= 3.3.1)
Imports: deSolve, msm, Rdpack (>= 0.7), stats, zoo
Suggests: covr, knitr, rmarkdown, testthat
RdMacros: Rdpack
Encoding: UTF-8
RoxygenNote: 7.2.3
Repository: https://trenchproject.r-universe.dev
Date/Publication: 2026-04-29 01:49:33 UTC
RemoteUrl: https://github.com/trenchproject/trenchr
RemoteRef: HEAD
RemoteSha: 5cbf49fef12a29e51c1e1d5aff258b46f17d011e
NeedsCompilation: no
Packaged: 2026-07-03 11:25:33 UTC; root
Author: Lauren Buckley [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1315-3818>),
  Bryan Briones Ortiz [aut],
  Isaac Caruso [aut],
  Aji John [aut] (ORCID: <https://orcid.org/0000-0002-4401-1401>),
  Ofir Levy [aut] (ORCID: <https://orcid.org/0000-0003-0920-1207>),
  Abigail Meyer [aut],
  Eric Riddell [aut] (ORCID: <https://orcid.org/0000-0002-4229-4911>),
  Yutaro Sakairi [aut],
  Juniper Simonis [aut] (ORCID: <https://orcid.org/0000-0001-9798-0460>),
  Brian Helmuth [ctb] (ORCID: <https://orcid.org/0000-0003-0180-3414>)