Package: TrenchR 1.1.1
TrenchR: Tools for Microclimate and Biophysical Ecology
Tools for translating environmental change into organismal response. Microclimate models to vertically scale weather station data to organismal heights. The biophysical modeling tools include both general models for heat flows and specific models to predict body temperatures for a variety of ectothermic taxa. Additional functions model and temporally partition air and soil temperatures and solar radiation. Utility functions estimate the organismal and environmental parameters needed for biophysical ecology. 'TrenchR' focuses on relatively simple and modular functions so users can create transparent and flexible biophysical models. Many functions are derived from Gates (1980) <doi:10.1007/978-1-4612-6024-0> and Campbell and Norman (1988) <isbn:9780387949376>.
Authors:
TrenchR_1.1.1.tar.gz
TrenchR_1.1.1.zip(r-4.5)TrenchR_1.1.1.zip(r-4.4)TrenchR_1.1.1.zip(r-4.3)
TrenchR_1.1.1.tgz(r-4.4-any)TrenchR_1.1.1.tgz(r-4.3-any)
TrenchR_1.1.1.tar.gz(r-4.5-noble)TrenchR_1.1.1.tar.gz(r-4.4-noble)
TrenchR_1.1.1.tgz(r-4.4-emscripten)TrenchR_1.1.1.tgz(r-4.3-emscripten)
TrenchR.pdf |TrenchR.html✨
TrenchR/json (API)
NEWS
# Install 'TrenchR' in R: |
install.packages('TrenchR', repos = c('https://trenchproject.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/trenchproject/trenchr/issues
Last updated 1 years agofrom:ca58d44041. Checks:OK: 3 NOTE: 4. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 13 2024 |
R-4.5-win | NOTE | Oct 13 2024 |
R-4.5-linux | NOTE | Oct 13 2024 |
R-4.4-win | NOTE | Oct 13 2024 |
R-4.4-mac | NOTE | Oct 13 2024 |
R-4.3-win | OK | Oct 13 2024 |
R-4.3-mac | OK | Oct 13 2024 |
Exports:actual_vapor_pressureair_temp_profileair_temp_profile_neutralair_temp_profile_segmentairpressure_from_elevazimuth_angleboundary_layer_resistancecelsius_to_kelvinday_of_yeardaylengthdec_angledegree_daysdegrees_to_radiansdirect_solar_radiationdiurnal_radiation_variationdiurnal_temp_variation_sinediurnal_temp_variation_sineexpdiurnal_temp_variation_sinesqrtDRYAIRexternal_resistance_to_water_vapor_transferfahrenheit_to_celsiusfahrenheit_to_kelvinfree_or_forced_convectionGrashof_numberGrashof_number_Gatesheat_transfer_coefficientheat_transfer_coefficient_approximationheat_transfer_coefficient_simplekelvin_to_celsiuslatent_heat_vaporization_h2omass_from_lengthmonthly_solar_radiationNusselt_from_GrashofNusselt_from_ReynoldsNusselt_numberpartition_solar_radiationPrandtl_numberproportion_diffuse_solar_radiationproportion_silhouette_areaproportion_silhouette_area_shapesQconduction_animalQconduction_substrateQconvectionQemitted_thermal_radiationQevaporationQmetabolism_from_massQmetabolism_from_mass_tempQnet_GatesQradiation_absorbedQthermal_radiation_absorbedradians_to_degreesReynolds_numbersaturation_vapor_pressuresaturation_water_vapor_pressuresoil_conductivitysoil_specific_heatsoil_temperaturesoil_temperature_equationsoil_temperature_functionsoil_temperature_integrandsolar_noonsolar_radiationspecific_heat_h2ostefan_boltzmann_constantsurface_area_from_lengthsurface_area_from_masssurface_area_from_volumesurface_roughnessT_skyTb_butterflyTb_CampbellNormanTb_GatesTb_Gates2Tb_grasshopperTb_limpetTb_limpetBHTb_lizardTb_lizard_FeiTb_musselTb_salamander_humidTb_snailTbed_musselTPCTPC_betaTsoilVAPPRSvolume_from_lengthvon_karman_constantWETAIRwind_speed_profile_neutralwind_speed_profile_segmentzenith_angle
Dependencies:clideSolveexpmfansigenericsgluelatticelifecyclemagrittrMatrixmsmmvtnormpillarpkgconfigrbibutilsRdpackrlangsurvivaltibbleutf8vctrszoo
Allometries and conversions
Rendered fromAllometryAndConversionsTutorial.Rmd
usingknitr::rmarkdown
on Oct 13 2024.Last update: 2022-10-14
Started: 2018-09-14
Estimating microclimates
Rendered fromMicroclimateTutorial.Rmd
usingknitr::rmarkdown
on Oct 13 2024.Last update: 2023-09-06
Started: 2018-09-13
List of symbols
Rendered fromSymbols.Rmd
usingknitr::rmarkdown
on Oct 13 2024.Last update: 2022-10-14
Started: 2019-12-11
Using energy balances to estimate body temperatures
Rendered fromTeTutorial.Rmd
usingknitr::rmarkdown
on Oct 13 2024.Last update: 2022-10-28
Started: 2018-08-10